IL_9RVC_121

3D structure

PDB id

9RVC (explore in PDB, NAKB, or RNA 3D Hub)

Description

staphylococcus aureus 70S initiation complex with natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAAUCGUUUUAAU*AUAGAAAAU

Length

23 nucleotides

Bulged bases

9RVC|1|a|U|1454, 9RVC|1|a|U|1455, 9RVC|1|a|U|1457, 9RVC|1|a|A|1630, 9RVC|1|a|G|1631, 9RVC|1|a|A|1635

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RVC|1|a|A|1447
9RVC|1|a|U|1448
9RVC|1|a|A|1449
9RVC|1|a|A|1450
9RVC|1|a|U|1451
9RVC|1|a|C|1452
9RVC|1|a|G|1453
9RVC|1|a|U|1454
9RVC|1|a|U|1455
9RVC|1|a|U|1456
9RVC|1|a|U|1457
9RVC|1|a|A|1458
9RVC|1|a|A|1459
9RVC|1|a|U|1460
*
9RVC|1|a|A|1628
9RVC|1|a|U|1629
9RVC|1|a|A|1630
9RVC|1|a|G|1631
9RVC|1|a|A|1632
9RVC|1|a|A|1633
9RVC|1|a|A|1634
9RVC|1|a|A|1635
9RVC|1|a|U|1636

Current chains

Chain a

23S rRNA

Nearby chains