3D structure

PDB id
9S3B (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.38 Å

Loop

Sequence
CGGUAA*UAAAUG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S3B|1|L5|C|1732
9S3B|1|L5|G|1733
9S3B|1|L5|G|1734
9S3B|1|L5|U|1735
9S3B|1|L5|A|1736
9S3B|1|L5|A|1737
*
9S3B|1|L5|U|1792
9S3B|1|L5|A|1793
9S3B|1|L5|A|1794
9S3B|1|L5|A|1795
9S3B|1|L5|U|1796
9S3B|1|L5|G|1797

Current chains

Chain L5
28S rRNA

Nearby chains

Chain L7
5S ribosomal RNA; 5S rRNA
Chain LD
60S ribosomal protein L5
Chain LF
Large ribosomal subunit protein uL30
Chain LI
Ribosomal protein uL16-like
Chain LS
60S ribosomal protein L18a
Chain LT
60S ribosomal protein L21

Coloring options:

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