IL_9S3C_003
3D structure
- PDB id
- 9S3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GAC*GCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S3C_003 not in the Motif Atlas
- Homologous match to IL_8GLP_003
- Geometric discrepancy: 0.0516
- The information below is about IL_8GLP_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_19025.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
9S3C|1|L5|G|16
9S3C|1|L5|A|17
9S3C|1|L5|C|18
*
9S3C|1|L8|G|139
9S3C|1|L8|C|140
9S3C|1|L8|C|141
Current chains
- Chain L5
- 28S rRNA
- Chain L8
- 5.8S rRNA
Nearby chains
- Chain LN
- 60S ribosomal protein L15
- Chain LX
- 60S ribosomal protein L23a
- Chain Lh
- 60S ribosomal protein L35
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