3D structure

PDB id
9S3C (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
UAUCAA*UGACCACG
Length
14 nucleotides
Bulged bases
9S3C|1|S2|U|361, 9S3C|1|S2|C|399
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S3C|1|S2|U|359
9S3C|1|S2|A|360
9S3C|1|S2|U|361
9S3C|1|S2|C|362
9S3C|1|S2|A|363
9S3C|1|S2|A|364
*
9S3C|1|S2|U|396
9S3C|1|S2|G|397
9S3C|1|S2|A|398
9S3C|1|S2|C|399
9S3C|1|S2|C|400
9S3C|1|S2|A|401
9S3C|1|S2|C|402
9S3C|1|S2|G|403

Current chains

Chain S2
18S rRNA

Nearby chains

Chain L5
Large subunit ribosomal RNA; LSU rRNA
Chain SI
40S ribosomal protein S8
Chain SL
40S ribosomal protein S11
Chain SX
40S ribosomal protein S23

Coloring options:

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