IL_9S7B_052

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

9S7B|1|A|A|3059, 9S7B|1|A|C|3060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7B_052 not in the Motif Atlas

Homologous match to IL_8B0X_156

Geometric discrepancy: 0.1438

The information below is about IL_8B0X_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.4

Basepair signature

cWW-cWW

Number of instances in this motif group

22

Unit IDs

9S7B|1|A|C|2999
9S7B|1|A|A|3000
*
9S7B|1|A|U|3058
9S7B|1|A|A|3059
9S7B|1|A|C|3060
9S7B|1|A|G|3061

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL3m

Chain K

Large ribosomal subunit protein uL13m