IL_9S7B_107

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7B_107 not in the Motif Atlas

Homologous match to IL_5E81_401

Geometric discrepancy: 0.5566

The information below is about IL_5E81_401

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_84227.1

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

20

Unit IDs

9S7B|1|Aw|A|5
9S7B|1|Aw|U|6
9S7B|1|Aw|A|7
*
9S7B|1|Aw|U|66
9S7B|1|Aw|U|67
9S7B|1|Aw|U|68

Current chains

Chain Aw

A-site tRNA (Visualisation example)

Nearby chains