IL_9S7C_040

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAU*AA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7C_040 not in the Motif Atlas

Geometric match to IL_9E6Q_003

Geometric discrepancy: 0.2475

The information below is about IL_9E6Q_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_98469.1

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

37

Unit IDs

9S7C|1|A|U|2744
9S7C|1|A|A|2745
9S7C|1|A|U|2746
*
9S7C|1|A|A|2802
9S7C|1|A|A|2803

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain X

Large ribosomal subunit protein bL28m