IL_9S7C_051

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUC*GUGAU

Length

8 nucleotides

Bulged bases

9S7C|1|A|G|3063, 9S7C|1|A|A|3064

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7C_051 not in the Motif Atlas

Homologous match to IL_8B0X_155

Geometric discrepancy: 0.1442

The information below is about IL_8B0X_155

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30722.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

20

Unit IDs

9S7C|1|A|A|2997
9S7C|1|A|U|2998
9S7C|1|A|C|2999
*
9S7C|1|A|G|3061
9S7C|1|A|U|3062
9S7C|1|A|G|3063
9S7C|1|A|A|3064
9S7C|1|A|U|3065

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL32m

Chain E

Large ribosomal subunit protein uL3m