IL_9S7C_090

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCU*AG

Length

5 nucleotides

Bulged bases

9S7C|1|AA|C|607

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7C_090 not in the Motif Atlas

Homologous match to IL_8B0X_044

Geometric discrepancy: 0.1976

The information below is about IL_8B0X_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

173

Unit IDs

9S7C|1|AA|C|606
9S7C|1|AA|C|607
9S7C|1|AA|U|608
*
9S7C|1|AA|A|691
9S7C|1|AA|G|692

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AD

Small ribosomal subunit protein uS5m

Chain AK

Small ribosomal subunit protein uS14m

Chain AZ

Small ribosomal subunit protein mS33