IL_9S7D_034

3D structure

PDB id

9S7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GC*GUAU

Length

6 nucleotides

Bulged bases

9S7D|1|A|U|2628, 9S7D|1|A|A|2629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7D_034 not in the Motif Atlas

Geometric match to IL_8ZAU_001

Geometric discrepancy: 0.1364

The information below is about IL_8ZAU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09092.1

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

9S7D|1|A|G|2596
9S7D|1|A|C|2597
*
9S7D|1|A|G|2627
9S7D|1|A|U|2628
9S7D|1|A|A|2629
9S7D|1|A|U|2630

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Small ribosomal subunit protein bS22, mitochondrial

Chain Ax

Transfer RNA; tRNA