IL_9S7D_062

3D structure

PDB id

9S7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAC*GA

Length

5 nucleotides

Bulged bases

9S7D|1|AA|A|44

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7D_062 not in the Motif Atlas

Geometric match to IL_9PN5_109

Geometric discrepancy: 0.2345

The information below is about IL_9PN5_109

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

9S7D|1|AA|U|43
9S7D|1|AA|A|44
9S7D|1|AA|C|45
*
9S7D|1|AA|G|175
9S7D|1|AA|A|176

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains