IL_9S7D_095
3D structure
- PDB id
- 9S7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAA*UAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S7D_095 not in the Motif Atlas
- Geometric match to IL_8CRE_402
- Geometric discrepancy: 0.1498
- The information below is about IL_8CRE_402
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9S7D|1|AA|C|627
9S7D|1|AA|A|628
9S7D|1|AA|A|629
9S7D|1|AA|A|630
*
9S7D|1|AA|U|651
9S7D|1|AA|A|652
9S7D|1|AA|A|653
9S7D|1|AA|G|654
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A1
- Small ribosomal subunit protein mS35
- Chain AB
- Small ribosomal subunit protein uS2m
- Chain AC
- Small ribosomal subunit protein uS3m
- Chain AD
- Small ribosomal subunit protein uS5m
- Chain AG
- Small ribosomal subunit protein uS9m
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