IL_9S7E_020
3D structure
- PDB id
- 9S7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUAAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S7E_020 not in the Motif Atlas
- Homologous match to IL_8B0X_108
- Geometric discrepancy: 0.1391
- The information below is about IL_8B0X_108
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9S7E|1|A|A|2306
9S7E|1|A|U|2307
9S7E|1|A|A|2308
9S7E|1|A|A|2309
9S7E|1|A|G|2310
9S7E|1|A|U|2311
9S7E|1|A|A|2312
9S7E|1|A|A|2313
*
9S7E|1|A|U|2674
9S7E|1|A|G|2675
9S7E|1|A|A|2676
9S7E|1|A|A|2677
9S7E|1|A|A|2678
9S7E|1|A|U|2679
9S7E|1|A|U|2680
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL32m
- Chain F
- Large ribosomal subunit protein uL4m
- Chain R
- Large ribosomal subunit protein bL20m
- Chain T
- Large ribosomal subunit protein uL22m
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