IL_9S7E_061

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AA*UAU

Length

5 nucleotides

Bulged bases

9S7E|1|AA|A|213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7E_061 not in the Motif Atlas

Homologous match to IL_8B0X_002

Geometric discrepancy: 0.2001

The information below is about IL_8B0X_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

9S7E|1|AA|A|38
9S7E|1|AA|A|39
*
9S7E|1|AA|U|212
9S7E|1|AA|A|213
9S7E|1|AA|U|214

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AM

Small ribosomal subunit protein bS16m

Chain AT

Small ribosomal subunit protein mS25