IL_9S7E_085

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

9S7E|1|AA|A|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7E_085 not in the Motif Atlas

Homologous match to IL_8B0X_038

Geometric discrepancy: 0.1376

The information below is about IL_8B0X_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

9S7E|1|AA|G|528
9S7E|1|AA|G|529
*
9S7E|1|AA|U|830
9S7E|1|AA|A|831
9S7E|1|AA|C|832

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A3

Small ribosomal subunit protein bS22, mitochondrial

Chain AD

Small ribosomal subunit protein uS5m