IL_9SLG_099
3D structure
- PDB id
- 9SLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Doxycycline Bound E. coli Ribosome with Rearranged Peptidyl Transferase Centre
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.16 Å
Loop
- Sequence
- UCCCAAAG*CA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SLG_099 not in the Motif Atlas
- Homologous match to IL_7A0S_034
- Geometric discrepancy: 0.1819
- The information below is about IL_7A0S_034
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_46868.1
- Basepair signature
- cWW-L-cWW-L-L-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
9SLG|1|a|U|1006
9SLG|1|a|C|1007
9SLG|1|a|C|1008
9SLG|1|a|C|1009
9SLG|1|a|A|1010
9SLG|1|a|A|1011
9SLG|1|a|A|1012
9SLG|1|a|G|1013
*
9SLG|1|a|C|1152
9SLG|1|a|A|1153
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain i
- Large ribosomal subunit protein uL13
- Chain p
- Large ribosomal subunit protein bL20
Coloring options: