IL_9SLG_140

3D structure

PDB id

9SLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Doxycycline Bound E. coli Ribosome with Rearranged Peptidyl Transferase Centre

Experimental method

ELECTRON MICROSCOPY

Resolution

2.16 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SLG|1|a|U|1853
9SLG|1|a|U|1854
9SLG|1|a|A|1855
9SLG|1|a|A|1856
9SLG|1|a|U|1857
9SLG|1|a|U|1858
9SLG|1|a|G|1859
9SLG|1|a|A|1860
9SLG|1|a|U|1861
9SLG|1|a|G|1862
*
9SLG|1|a|U|1886
9SLG|1|a|U|1887
9SLG|1|a|G|1888
9SLG|1|a|A|1889
9SLG|1|a|U|1890
9SLG|1|a|C|1891
9SLG|1|a|G|1892
9SLG|1|a|A|1893
9SLG|1|a|A|1894
9SLG|1|a|G|1895

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 6

Large ribosomal subunit protein uL1