IL_9SRO_035
3D structure
- PDB id
- 9SRO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SRO_035 not in the Motif Atlas
- Homologous match to IL_6CZR_144
- Geometric discrepancy: 0.1262
- The information below is about IL_6CZR_144
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
9SRO|1|A|G|774
9SRO|1|A|G|775
9SRO|1|A|G|776
9SRO|1|A|A|777
9SRO|1|A|G|778
*
9SRO|1|A|U|804
9SRO|1|A|C|805
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: