IL_9SS2_051
3D structure
- PDB id
- 9SS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUGC*GAACUC
- Length
- 11 nucleotides
- Bulged bases
- 9SS2|1|D1|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SS2_051 not in the Motif Atlas
- Geometric match to IL_8B0X_050
- Geometric discrepancy: 0.1495
- The information below is about IL_8B0X_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38603.1
- Basepair signature
- cWW-cWS-L-R-L-R-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9SS2|1|D1|G|1124
9SS2|1|D1|U|1125
9SS2|1|D1|U|1126
9SS2|1|D1|G|1127
9SS2|1|D1|C|1128
*
9SS2|1|D1|G|1144
9SS2|1|D1|A|1145
9SS2|1|D1|A|1146
9SS2|1|D1|C|1147
9SS2|1|D1|U|1148
9SS2|1|D1|C|1149
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AH
- Small ribosomal subunit protein uS9
- Chain AI
- Small ribosomal subunit protein uS10
Coloring options: