IL_9SS5_074

3D structure

PDB id

9SS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit in rimM-KO with RsfS (+H68)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS5|1|D2|U|1851
9SS5|1|D2|U|1852
9SS5|1|D2|A|1853
9SS5|1|D2|A|1854
9SS5|1|D2|U|1855
9SS5|1|D2|U|1856
9SS5|1|D2|G|1857
9SS5|1|D2|A|1858
9SS5|1|D2|U|1859
9SS5|1|D2|G|1860
*
9SS5|1|D2|U|1882
9SS5|1|D2|U|1883
9SS5|1|D2|G|1884
9SS5|1|D2|A|1885
9SS5|1|D2|U|1886
9SS5|1|D2|C|1887
9SS5|1|D2|G|1888
9SS5|1|D2|A|1889
9SS5|1|D2|A|1890
9SS5|1|D2|G|1891

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains