IL_9SUM_001

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

9SUM|1|C|C|147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05642.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

72

Unit IDs

9SUM|1|A|C|5
9SUM|1|A|C|6
*
9SUM|1|C|G|146
9SUM|1|C|C|147
9SUM|1|C|G|148

Current chains

Chain A

25S rRNA

Chain C

5.8S rRNA

Nearby chains

Chain J

60S ribosomal protein L8

Chain P

Ribosomal protein L15

Chain Z

Large ribosomal subunit protein uL23