IL_9SUM_016
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAAAAGAC*GUGAUG
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|A|A|468, 9SUM|1|A|A|469
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22723.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
9SUM|1|A|U|467
9SUM|1|A|A|468
9SUM|1|A|A|469
9SUM|1|A|A|470
9SUM|1|A|A|471
9SUM|1|A|G|472
9SUM|1|A|A|473
9SUM|1|A|C|474
*
9SUM|1|A|G|517
9SUM|1|A|U|518
9SUM|1|A|G|519
9SUM|1|A|A|520
9SUM|1|A|U|521
9SUM|1|A|G|522
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4-A
- Chain I
- 60S ribosomal protein L7
- Chain O
- Large ribosomal subunit protein eL14 domain-containing protein
- Chain U
- 60S ribosomal protein L20-A
Coloring options: