IL_9SUM_026
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9SUM|1|A|A|876, 9SUM|1|A|G|880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.4
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9SUM|1|A|G|748
9SUM|1|A|A|749
9SUM|1|A|A|750
9SUM|1|A|A|751
9SUM|1|A|G|752
*
9SUM|1|A|C|874
9SUM|1|A|U|875
9SUM|1|A|A|876
9SUM|1|A|G|877
9SUM|1|A|U|878
9SUM|1|A|A|879
9SUM|1|A|G|880
9SUM|1|A|C|881
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4-A
- Chain N
- 60S ribosomal protein L13
- Chain P
- Ribosomal protein L15
- Chain c
- 60S ribosomal protein L28
- Chain l
- Ribosomal protein L37
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