IL_9SUM_032

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GGG*UAAUC

Length

8 nucleotides

Bulged bases

9SUM|1|A|G|851, 9SUM|1|A|A|863, 9SUM|1|A|A|864, 9SUM|1|A|U|865

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89509.4

Basepair signature

cWW-cWW

Number of instances in this motif group

11

Unit IDs

9SUM|1|A|G|850
9SUM|1|A|G|851
9SUM|1|A|G|852
*
9SUM|1|A|U|862
9SUM|1|A|A|863
9SUM|1|A|A|864
9SUM|1|A|U|865
9SUM|1|A|C|866

Current chains

Chain A

25S rRNA

Nearby chains

Chain D

60S ribosomal protein L2-A

Chain P

Ribosomal protein L15

Chain R

60S ribosomal protein L17-B

Chain l

Ribosomal protein L37