IL_9SUM_035

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CGUUACAAAC*GUAG

Length

14 nucleotides

Bulged bases

9SUM|1|A|C|925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SUM|1|A|C|920
9SUM|1|A|G|921
9SUM|1|A|U|922
9SUM|1|A|U|923
9SUM|1|A|A|924
9SUM|1|A|C|925
9SUM|1|A|A|926
9SUM|1|A|A|927
9SUM|1|A|A|928
9SUM|1|A|C|929
*
9SUM|1|A|G|1048
9SUM|1|A|U|1049
9SUM|1|A|A|1050
9SUM|1|A|G|1051

Current chains

Chain A

25S rRNA

Nearby chains

Chain I

60S ribosomal protein L7

Chain S

60S ribosomal protein L18-A

Chain d

60S ribosomal protein L29