IL_9SUM_046
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UUAAA*UUAUA
- Length
- 10 nucleotides
- Bulged bases
- 9SUM|1|A|U|1278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.4
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 27
Unit IDs
9SUM|1|A|U|1114
9SUM|1|A|U|1115
9SUM|1|A|A|1116
9SUM|1|A|A|1117
9SUM|1|A|A|1118
*
9SUM|1|A|U|1275
9SUM|1|A|U|1276
9SUM|1|A|A|1277
9SUM|1|A|U|1278
9SUM|1|A|A|1279
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain I
- 60S ribosomal protein L7
- Chain S
- 60S ribosomal protein L18-A
- Chain g
- 60S ribosomal protein L32
- Chain h
- 60S ribosomal protein L33-A
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