IL_9SUM_051

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

9SUM|1|A|U|1155

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.8

Basepair signature

cWW-L-cWW

Number of instances in this motif group

192

Unit IDs

9SUM|1|A|G|1154
9SUM|1|A|U|1155
9SUM|1|A|G|1156
*
9SUM|1|A|C|1243
9SUM|1|A|C|1244

Current chains

Chain A

25S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain K

60S ribosomal protein L9-B

Chain U

60S ribosomal protein L20-A

Chain o

Large ribosomal subunit protein eL40