IL_9SUM_056

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

UCAAC*GGA

Length

8 nucleotides

Bulged bases

9SUM|1|A|G|1457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_63596.15

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

24

Unit IDs

9SUM|1|A|U|1444
9SUM|1|A|C|1445
9SUM|1|A|A|1446
9SUM|1|A|A|1447
9SUM|1|A|C|1448
*
9SUM|1|A|G|1456
9SUM|1|A|G|1457
9SUM|1|A|A|1458

Current chains

Chain A

25S rRNA

Nearby chains

Chain R

60S ribosomal protein L17-B

Chain T

Ribosomal protein L19

Chain n

Large ribosomal subunit protein eL39