IL_9SUM_057
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CUAAC*GGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 9SUM|1|A|A|1530, 9SUM|1|A|A|1531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.4
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 27
Unit IDs
9SUM|1|A|C|1475
9SUM|1|A|U|1476
9SUM|1|A|A|1477
9SUM|1|A|A|1478
9SUM|1|A|C|1479
*
9SUM|1|A|G|1527
9SUM|1|A|G|1528
9SUM|1|A|A|1529
9SUM|1|A|A|1530
9SUM|1|A|A|1531
9SUM|1|A|G|1532
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D
- 60S ribosomal protein L2-A
- Chain i
- 60S ribosomal protein L34-B
- Chain l
- Ribosomal protein L37
- Chain n
- Large ribosomal subunit protein eL39
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