IL_9SUM_066

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CUGUG*UUGUUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SUM|1|A|C|1642
9SUM|1|A|U|1643
9SUM|1|A|G|1644
9SUM|1|A|U|1645
9SUM|1|A|G|1646
*
9SUM|1|A|U|1678
9SUM|1|A|U|1679
9SUM|1|A|G|1680
9SUM|1|A|U|1681
9SUM|1|A|U|1682
9SUM|1|A|G|1683

Current chains

Chain A

25S rRNA

Nearby chains

Chain i

60S ribosomal protein L34-B