IL_9SUM_077
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CGAUGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|A|U|2074, 9SUM|1|A|U|2090, 9SUM|1|A|C|2094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14684.4
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9SUM|1|A|C|2071
9SUM|1|A|G|2072
9SUM|1|A|A|2073
9SUM|1|A|U|2074
9SUM|1|A|G|2075
9SUM|1|A|G|2076
*
9SUM|1|A|U|2088
9SUM|1|A|G|2089
9SUM|1|A|U|2090
9SUM|1|A|U|2091
9SUM|1|A|G|2092
9SUM|1|A|A|2093
9SUM|1|A|C|2094
9SUM|1|A|G|2095
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain D
- 60S ribosomal protein L2-A
- Chain r
- 60S ribosomal protein L43
Coloring options: