IL_9SUM_089
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GUGAAGG*CCGU
- Length
- 11 nucleotides
- Bulged bases
- 9SUM|1|A|G|2437, 9SUM|1|A|C|2485, 9SUM|1|A|G|2486
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52092.4
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9SUM|1|A|G|2435
9SUM|1|A|U|2436
9SUM|1|A|G|2437
9SUM|1|A|A|2438
9SUM|1|A|A|2439
9SUM|1|A|G|2440
9SUM|1|A|G|2441
*
9SUM|1|A|C|2484
9SUM|1|A|C|2485
9SUM|1|A|G|2486
9SUM|1|A|U|2487
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D
- 60S ribosomal protein L2-A
- Chain J
- 60S ribosomal protein L8
- Chain Z
- Large ribosomal subunit protein uL23
Coloring options: