IL_9SUM_112
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 9SUM|1|A|U|2957, 9SUM|1|A|U|2959
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SUM_112 not in the Motif Atlas
- Homologous match to IL_9AXU_111
- Geometric discrepancy: 0.1424
- The information below is about IL_9AXU_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43276.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9SUM|1|A|U|2955
9SUM|1|A|A|2956
9SUM|1|A|U|2957
9SUM|1|A|U|2958
9SUM|1|A|U|2959
9SUM|1|A|G|2960
*
9SUM|1|A|C|2985
9SUM|1|A|G|2986
9SUM|1|A|A|2987
9SUM|1|A|A|2988
9SUM|1|A|G|2989
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL3
- Chain Y
- 60S ribosomal protein L24
- Chain f
- 60S ribosomal protein L31-A
Coloring options: