IL_9SUM_118
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UACGAAUAAG*CGCGGAA
- Length
- 17 nucleotides
- Bulged bases
- 9SUM|1|A|A|3083, 9SUM|1|A|A|3089
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68936.2
- Basepair signature
- cWW-L-R-L-cWW-L-cWW-cSS-L
- Number of instances in this motif group
- 3
Unit IDs
9SUM|1|A|U|3082
9SUM|1|A|A|3083
9SUM|1|A|C|3084
9SUM|1|A|G|3085
9SUM|1|A|A|3086
9SUM|1|A|A|3087
9SUM|1|A|U|3088
9SUM|1|A|A|3089
9SUM|1|A|A|3090
9SUM|1|A|G|3091
*
9SUM|1|A|C|3098
9SUM|1|A|G|3099
9SUM|1|A|C|3100
9SUM|1|A|G|3101
9SUM|1|A|G|3102
9SUM|1|A|A|3103
9SUM|1|A|A|3104
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain H
- 60S ribosomal protein L6
- Chain K
- 60S ribosomal protein L9-B
- Chain O
- Large ribosomal subunit protein eL14 domain-containing protein
- Chain Q
- 60S ribosomal protein L16-B
- Chain U
- 60S ribosomal protein L20-A
- Chain h
- 60S ribosomal protein L33-A
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