IL_9SUM_133
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- AGUGAGUAA*UGAAAUU
- Length
- 16 nucleotides
- Bulged bases
- 9SUM|1|B|G|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62167.6
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9SUM|1|B|A|73
9SUM|1|B|G|74
9SUM|1|B|U|75
9SUM|1|B|G|76
9SUM|1|B|A|77
9SUM|1|B|G|78
9SUM|1|B|U|79
9SUM|1|B|A|80
9SUM|1|B|A|81
*
9SUM|1|B|U|101
9SUM|1|B|G|102
9SUM|1|B|A|103
9SUM|1|B|A|104
9SUM|1|B|A|105
9SUM|1|B|U|106
9SUM|1|B|U|107
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain I
- 60S ribosomal protein L7
- Chain L
- 60S ribosomal protein L10
- Chain U
- 60S ribosomal protein L20-A
- Chain V
- 60S ribosomal protein L21-A
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