IL_9SUM_155
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAUCAA*UUUCAACG
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|CA|U|302, 9SUM|1|CA|C|340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_46174.7
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 8
Unit IDs
9SUM|1|CA|U|300
9SUM|1|CA|A|301
9SUM|1|CA|U|302
9SUM|1|CA|C|303
9SUM|1|CA|A|304
9SUM|1|CA|A|305
*
9SUM|1|CA|U|337
9SUM|1|CA|U|338
9SUM|1|CA|U|339
9SUM|1|CA|C|340
9SUM|1|CA|A|341
9SUM|1|CA|A|342
9SUM|1|CA|C|343
9SUM|1|CA|G|344
Current chains
- Chain CA
- 18S rRNA
Nearby chains
- Chain ZA
- 40S ribosomal protein S8
- Chain ZD
- 40S ribosomal protein S11-A
- Chain ZP
- 40S ribosomal protein S23
Coloring options: