IL_9SUM_180
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 9SUM|1|CA|G|846
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9SUM|1|CA|C|844
9SUM|1|CA|G|845
9SUM|1|CA|G|846
9SUM|1|CA|G|847
9SUM|1|CA|G|848
*
9SUM|1|CA|C|920
9SUM|1|CA|A|921
9SUM|1|CA|A|922
9SUM|1|CA|G|923
Current chains
- Chain CA
- 18S rRNA
Nearby chains
- Chain ZE
- 40S ribosomal protein S13
- Chain ZS
- 40S ribosomal protein S26
- Chain e
- 60S ribosomal protein L30
- Chain t
- Small ribosomal subunit protein eS1
Coloring options: