IL_9SUM_203
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 9SUM|1|CA|C|1244, 9SUM|1|CA|U|1408, 9SUM|1|CA|G|1411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SUM|1|CA|U|1242
9SUM|1|CA|G|1243
9SUM|1|CA|C|1244
9SUM|1|CA|A|1245
9SUM|1|CA|U|1246
9SUM|1|CA|G|1247
9SUM|1|CA|G|1248
*
9SUM|1|CA|U|1406
9SUM|1|CA|C|1407
9SUM|1|CA|U|1408
9SUM|1|CA|G|1409
9SUM|1|CA|U|1410
9SUM|1|CA|G|1411
9SUM|1|CA|A|1412
9SUM|1|CA|U|1413
9SUM|1|CA|G|1414
Current chains
- Chain CA
- 18S rRNA
Nearby chains
- Chain ZC
- 40S ribosomal protein S10-A
- Chain ZL
- Small ribosomal subunit protein uS10
- Chain ZV
- Small ribosomal subunit protein uS14
- Chain v
- Small ribosomal subunit protein uS3
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