IL_9SUM_206

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

9SUM|1|CA|A|1403

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

188

Unit IDs

9SUM|1|CA|C|1250
9SUM|1|CA|G|1251
*
9SUM|1|CA|C|1402
9SUM|1|CA|A|1403
9SUM|1|CA|G|1404

Current chains

Chain CA

18S rRNA

Nearby chains

Chain ZH

Small ribosomal subunit protein uS9

Chain ZL

Small ribosomal subunit protein uS10

Chain ZV

Small ribosomal subunit protein uS14

Chain u

Rps21 ribosomal protein

Chain v

Small ribosomal subunit protein uS3