IL_9SYH_065
3D structure
- PDB id
- 9SYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from deltaRlmE strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.89 Å
Loop
- Sequence
- CCU*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYH_065 not in the Motif Atlas
- Geometric match to IL_8GLP_233
- Geometric discrepancy: 0.1559
- The information below is about IL_8GLP_233
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.5
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 238
Unit IDs
9SYH|1|A|C|1535
9SYH|1|A|C|1536
9SYH|1|A|U|1537
*
9SYH|1|X|G|9
9SYH|1|X|A|10
9SYH|1|X|G|11
Current chains
- Chain A
- 16S rRNA
- Chain X
- mRNA
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7
- Chain K
- Small ribosomal subunit protein uS11
- Chain R
- Small ribosomal subunit protein bS18
- Chain U
- Small ribosomal subunit protein bS21
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