IL_9SYH_071

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

GGAACUG*CUAAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|a|G|188
9SYH|1|a|G|189
9SYH|1|a|A|190
9SYH|1|a|A|191
9SYH|1|a|C|192
9SYH|1|a|U|193
9SYH|1|a|G|194
*
9SYH|1|a|C|201
9SYH|1|a|U|202
9SYH|1|a|A|203
9SYH|1|a|A|204
9SYH|1|a|G|205
9SYH|1|a|U|206
9SYH|1|a|A|207
9SYH|1|a|C|208

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain 2

Large ribosomal subunit protein bL35

Chain k

Large ribosomal subunit protein uL15

Chain w

Large ribosomal subunit protein bL28