3D structure

PDB id
9SYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome from deltaRlmE strain
Experimental method
ELECTRON MICROSCOPY
Resolution
1.89 Å

Loop

Sequence
GGAG*UGAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9SYH|1|a|G|536
9SYH|1|a|G|537
9SYH|1|a|A|538
9SYH|1|a|G|539
*
9SYH|1|a|U|554
9SYH|1|a|G|555
9SYH|1|a|A|556
9SYH|1|a|C|557

Current chains

Chain a
23S rRNA

Nearby chains

Chain i
Large ribosomal subunit protein uL13
Chain p
Large ribosomal subunit protein bL20

Coloring options:

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