IL_9SYH_109

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

AUAAGUAA*UGAAAUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|a|A|1262
9SYH|1|a|U|1263
9SYH|1|a|A|1264
9SYH|1|a|A|1265
9SYH|1|a|G|1266
9SYH|1|a|U|1267
9SYH|1|a|A|1268
9SYH|1|a|A|1269
*
9SYH|1|a|U|2011
9SYH|1|a|G|2012
9SYH|1|a|A|2013
9SYH|1|a|A|2014
9SYH|1|a|A|2015
9SYH|1|a|U|2016
9SYH|1|a|U|2017

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32