IL_9SYH_154
3D structure
- PDB id
- 9SYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from deltaRlmE strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.89 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYH_154 not in the Motif Atlas
- Homologous match to IL_7A0S_081
- Geometric discrepancy: 0.1488
- The information below is about IL_7A0S_081
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.3
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 47
Unit IDs
9SYH|1|a|C|2350
9SYH|1|a|G|2351
9SYH|1|a|A|2352
9SYH|1|a|G|2353
*
9SYH|1|a|C|2364
9SYH|1|a|G|2365
9SYH|1|a|A|2366
9SYH|1|a|G|2367
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain v
- Large ribosomal subunit protein bL27
Coloring options: