IL_9SYR_004
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_004 not in the Motif Atlas
- Homologous match to IL_8GLP_004
- Geometric discrepancy: 0.1007
- The information below is about IL_8GLP_004
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 59
Unit IDs
9SYR|1|L1|C|26
9SYR|1|L1|C|27
*
9SYR|1|L1|G|55
9SYR|1|L1|A|56
9SYR|1|L1|G|57
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain L3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LA
- Large ribosomal subunit protein eL37
- Chain LH
- 60S ribosomal protein L15
- Chain Ly
- 60S ribosomal protein L35
Coloring options: