IL_9SYR_017
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GUGAAAC*GUGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_017 not in the Motif Atlas
- Homologous match to IL_8GLP_021
- Geometric discrepancy: 0.0759
- The information below is about IL_8GLP_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.4
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 12
Unit IDs
9SYR|1|L1|G|415
9SYR|1|L1|U|416
9SYR|1|L1|G|417
9SYR|1|L1|A|418
9SYR|1|L1|A|419
9SYR|1|L1|A|420
9SYR|1|L1|C|421
*
9SYR|1|L3|G|13
9SYR|1|L3|U|14
9SYR|1|L3|G|15
9SYR|1|L3|G|16
9SYR|1|L3|A|17
9SYR|1|L3|U|18
9SYR|1|L3|C|19
Current chains
- Chain L1
- 28S rRNA
- Chain L3
- 5.8S rRNA
Nearby chains
- Chain Lc
- 60S ribosomal protein L4
- Chain Lg
- 60S ribosomal protein L17
- Chain Lv
- 60S ribosomal protein L32
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