IL_9SYR_031

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9SYR|1|L1|A|932, 9SYR|1|L1|C|934, 9SYR|1|L1|A|935, 9SYR|1|L1|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|A|732
9SYR|1|L1|A|733
9SYR|1|L1|G|734
9SYR|1|L1|G|735
*
9SYR|1|L1|C|928
9SYR|1|L1|A|929
9SYR|1|L1|G|930
9SYR|1|L1|C|931
9SYR|1|L1|A|932
9SYR|1|L1|G|933
9SYR|1|L1|C|934
9SYR|1|L1|A|935
9SYR|1|L1|C|936
9SYR|1|L1|U|937

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L14

Chain Lc

60S ribosomal protein L4

Chain Lj

60S ribosomal protein L18a