IL_9SYR_050

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

(OMG)A(A2M)AG*CUAGUAGC

Length

13 nucleotides

Bulged bases

9SYR|1|L1|A|1650, 9SYR|1|L1|G|1654

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|OMG|1522
9SYR|1|L1|A|1523
9SYR|1|L1|A2M|1524
9SYR|1|L1|A|1525
9SYR|1|L1|G|1526
*
9SYR|1|L1|C|1648
9SYR|1|L1|U|1649
9SYR|1|L1|A|1650
9SYR|1|L1|G|1651
9SYR|1|L1|U|1652
9SYR|1|L1|A|1653
9SYR|1|L1|G|1654
9SYR|1|L1|C|1655

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LA

Large ribosomal subunit protein eL37

Chain LH

60S ribosomal protein L15

Chain LP

Large ribosomal subunit protein eL13

Chain Lc

60S ribosomal protein L4

Chain Lr

60S ribosomal protein L27a