IL_9SYR_071
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9SYR|1|L1|C|1935, 9SYR|1|L1|A|2041, 9SYR|1|L1|U|2044, 9SYR|1|L1|G|2045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|L1|G|1933
9SYR|1|L1|A|1934
9SYR|1|L1|C|1935
9SYR|1|L1|C|1936
9SYR|1|L1|C|1937
9SYR|1|L1|C|1938
9SYR|1|L1|A|1939
9SYR|1|L1|G|1940
9SYR|1|L1|A|1941
9SYR|1|L1|A|1942
9SYR|1|L1|A|1943
9SYR|1|L1|A|1944
*
9SYR|1|L1|U|2038
9SYR|1|L1|G|2039
9SYR|1|L1|A|2040
9SYR|1|L1|A|2041
9SYR|1|L1|A|2042
9SYR|1|L1|A|2043
9SYR|1|L1|U|2044
9SYR|1|L1|G|2045
9SYR|1|L1|G|2046
9SYR|1|L1|A|2047
9SYR|1|L1|U|2048
9SYR|1|L1|G|2049
9SYR|1|L1|G|2050
9SYR|1|L1|C|2051
9SYR|1|L1|G|2052
9SYR|1|L1|C|2053
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain L2
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- Ubiquitin-60S ribosomal protein L40
- Chain LM
- 60S ribosomal protein L10
- Chain Lb
- 60S ribosomal protein L3
- Chain Lf
- Large ribosomal subunit protein uL13
- Chain Lw
- 60S ribosomal protein L35a
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