IL_9SYR_080

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

(OMU)GAAC*GAA

Length

8 nucleotides

Bulged bases

9SYR|1|L1|A|2428

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|OMU|2415
9SYR|1|L1|G|2416
9SYR|1|L1|A|2417
9SYR|1|L1|A|2418
9SYR|1|L1|C|2419
*
9SYR|1|L1|G|2427
9SYR|1|L1|A|2428
9SYR|1|L1|A|2429

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L39

Chain LN

Green fluorescent protein,Small ubiquitin-related modifier 1,Green fluorescent protein,Small ubiquitin-related modifier 1,Histone H4,X-box-binding protein 1,X-box-binding protein 1

Chain Lg

60S ribosomal protein L17

Chain Li

60S ribosomal protein L19

Chain Na

Nascent polypeptide-associated complex subunit alpha